[Characteristic of the new Khatanga virus genotype]

Vestn Ross Akad Med Nauk. 2011:(5):45-9.
[Article in Russian]

Abstract

Complete nucleotide sequence of the S-segment and partial sequences of M- and L-segments (981 and 1005 nucleotide respectively) have been determined in 20 strains of California encephalitis serocomplex, isolated in Yakitiya, Sakhalin, and Kamchatka. The phylogenetic analysis ofgenomic S-, M-, and L-segments showed that all 20 strains are related to Khatanga virus (La Cross subtype of California encephalitis serotype). Eight strains belong to group 2 of Khatanga virus while the remaining 12 make up a new (third) genetic group of this virus having original S- and M-segments and L-segment similar to that of the second group.

Publication types

  • English Abstract

MeSH terms

  • Base Sequence / genetics*
  • Classification
  • Encephalitis, California* / epidemiology
  • Encephalitis, California* / virology
  • Genome, Viral*
  • Genome-Wide Association Study
  • Humans
  • La Crosse virus / genetics*
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Viral / genetics
  • Russia / epidemiology

Substances

  • RNA, Viral